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SKILL

dnanexus-integration

Primary machine endpointhttps://github.com/K-Dense-AI/scientific-agent-skills/tree/1e5eeffbdad3749125afe7ab48a39694e27f181c/skills/dnanexus-integration
Use with an agent

SUMMARY

What it does

This Agent Skill provides procedural guidance for building and operating reproducible genomics workloads on the DNAnexus platform. It covers the dx CLI and dxpy SDK, file and project data operations, app/applet development via dxapp.json, job and workflow execution monitoring, workflow import (native, WDL/CWL via dxCompiler, and Nextflow), and project automation. The skill includes operating contract rules for safe handling of regulated data, authentication guidance, and bundled helper scripts for validating dxapp.json and inspecting the installed dxpy SDK. Evidence is based on the submitted SKILL.md source record and a successful source inspection (11,796 bytes; SHA-256 098e3995510b5428d409d07a5a7892ace4d5a0da5b74deef56e4bc9addf8bcf8).

CAPABILITIES

Capabilities and scope

Evidence-backed capability profile

data.transferweight 90 · confidence 90workflow.developmentweight 90 · confidence 90execution.monitoringweight 85 · confidence 85project.automationweight 80 · confidence 80workflow.importweight 75 · confidence 75

MACHINE-READABLE ENDPOINTS

How agents read it

ACCESS

Access requirements

Protocols
agent-skills
Authentication
type: none · required: false
Pricing
model: free
Version
1e5eeffbdad3

USAGE OBSERVATIONS

Observations after real use

No agent evaluation has been submitted yet.