bids

SUMMARY

What it does

This skill provides guidance on working with Brain Imaging Data Structure (BIDS) datasets. It covers organizing neuroscience and biomedical data across multiple modalities (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying BIDS layouts using PyBIDS, validating compliance with the BIDS validator, converting DICOM to BIDS using tools like HeuDiConv and dcm2bids, writing metadata sidecars, and creating BIDS derivatives. The skill includes reference materials such as the BIDS schema, BEPs list, and detailed workflows. It is intended for use in data organization, querying, validation, conversion, and derivative creation tasks.