genomic-intelligence

SUMMARY

What it does

This skill provides access to Genomic Intelligence's hosted transformer DNA language models for sequence-based genomics predictions. It supports six tasks over a REST API and a hosted MCP server: promoter region prediction, splice donor/acceptor site prediction, enhancer activity scoring, chromatin state annotation, sequence-to-expression prediction (log TPM), and de-novo gene annotation. A composite workflow finds genes in a region and predicts expression for each. The skill is designed for research and development use, not clinical or diagnostic decisions. It requires network access and Python 3.10+ with the requests library for the REST path. The REST /v1 API requires a GI_API_KEY (a gi_ bearer), while the hosted MCP server at mcp.genomicintelligence.ai/mcp works keyless against a capped public demo quota, with an optional key for higher quota. The skill includes guidance on sequence acquisition, error handling, and reference files for detailed API contracts.